PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.WC91U
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 159aa    MW: 17530 Da    PI: 7.4396
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.WC91UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.5e-074183754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                 ++Er  R+++N+++   r+++Pk +      K++ a+iL  A++++++L
  Araip.WC91U 41 MAERWHRKKLNDRLYMFRSIVPKiS------KMDRASILGDAINCLREL 83
                 79*********************66......**************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.09E-133198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.7163483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.87E-93787No hitNo description
SMARTSM003532.6E-84089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-44183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-114196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MVVEESGNHS GRGNGNLSLS GGVNGGDQKG KKKGMPVKNL MAERWHRKKL NDRLYMFRSI  60
VPKISKMDRA SILGDAINCL RELLQQINDL HNELESTPPG SSLQSSTTIL QTLTPTPQTL  120
PCQGKEELYP GVLPCPNTNL QSVDDGFPLV TFYFEMDSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016189809.11e-116PREDICTED: transcription factor ICE1-like isoform X1
RefseqXP_016189810.11e-116PREDICTED: transcription factor ICE1-like isoform X1
SwissprotQ9LSE24e-44ICE1_ARATH; Transcription factor ICE1
TrEMBLI7EMG72e-52I7EMG7_CAMSI; ICE1
STRINGPOPTR_0012s10780.12e-47(Populus trichocarpa)
STRINGGLYMA16G05390.11e-47(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24143482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.44e-35bHLH family protein